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PhaME -- Phylogenetic Analysis and Molecular Evolution

*Beta version*

PhaME is a whole-genome SNP-based tool that calculates core genome and SNPs, parse them to coding or non-coding regions, identify synonymous and non-synonymous SNPs, reconstruct phylogeny, and perform molecular evolutionary analysis to identify genes under selection from finished genomes, contigs, and/or raw FASTQ reads.

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System Specifications

CPU: 4, Mem: 32 GB